Man pages for xinchoubiology/Rcppsva
Rcpp Integration Surrogate Variable Analysis

arma_eigenarma_eigen
average_linkageaverage_linkage
Beta.NABeta.NA
beta_regressbeta_regress
bootstrap.fitbootstrap.fit
bootstrap_regressbootstrap_regress
bumphuntingEnginebumphuntingEngine
bumps-classClass "bumps" The class contains information of methyaltion...
clique_mergeclique_merge
clusterMakerclusterMaker
ComBatAdjust for batch effects using an empirical Bayesian or...
combine.pvaluecombine.pvalue
complete_linkagecomplete_linkage
corrclusterMakercorrclusterMaker
DbpmergeDbpmerge
dendro.datadendro.data
dendrogramdendrogram
distance_kindsdistance_kinds
distributeRefdistributeRef
EigenbetaEigenbeta
estDimRMTestDimRMT
gapStatgapStat
get450Ksheetget450Ksheet
get450Kurlget450Kurl
get450Kzipget450Kzip
get.bumps-methodsget.bumps method
getTCGAssemblegetTCGAssemble
HClustHClust
hclust_from_datahclust_from_data
Index.NAIndex.NA
int_epriorint_eprior
int.epriorMonte Carlo integration functions
isvaFnisvaFn
linkage_kindslinkage_kinds
List2IndexList2Index
memberDendmemberDend
memberLimitmemberLimit
midDendmidDend
mlm.fitmlm.fit
mlm.tstatmlm.tstat
moduleSearchmoduleSearch
optimModuleoptimModule
plotplot correlation matrix by ggplot
preProcess450KpreProcess450K
preProcessDMRpreProcessDMR
printout.R is used to print/plot data object in Rcppsva to...
pvaluepvalue
rankmrankm
RcppsvaAccelerate version of sva packaga on Bioconductor
regionSeekerregionSeeker
segmentsClustersegmentsCluster
segmentsMakersegmentsMaker
show-methodsshow
single_linkagesingle_linkage
smoothersmoother
stouffer_liptak.combpstouffer_liptak.combp
svaRegsvaReg
theme_dendrotheme_dendro
wilcox.fitwilcox.fit
zscore.combpzscore.combp
xinchoubiology/Rcppsva documentation built on May 28, 2017, 7:37 a.m.