checkMiRNAFamliy: Check the miRNA family

Description Usage Arguments Value Author(s) Examples

View source: R/miRBaseConvert.R

Description

This function checks the miRNA family for a list of miRNA Names.

Usage

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checkMiRNAFamliy(Accessions)

Arguments

Accessions

A character vector representing the miRNA Accessions in miRBase.

Value

A data frame with four columns. The number of rows equal to the input Accessions. The four columns are defined as below:

Author(s)

Xu, Taosheng [email protected]

Examples

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data(miRNATest)
## The input is miRNA Accessions
Accessions=miRNATest$Accession
Family_Info1=checkMiRNAFamliy(Accessions)

##The input is miRNA names
miRNANames=miRNATest$miRNA_Name
version=checkMiRNAVersion(miRNANames,verbose = TRUE)
result=miRNA_NameToAccession(miRNANames,version=version)
Accessions=result$Accession
Family_Info2=checkMiRNAFamliy(Accessions)

xtsvm/miRBaseConverter documentation built on May 20, 2019, 5:08 p.m.