Description Usage Arguments Details Value
Downloading SRA using 'ascp' utility or Aspera Connect.
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email |
Your email address that farm will email to once the job was done/failed. |
sra |
An input data.frame for SRA ids. Must contains column: SRR. |
maxspeed |
The max speed for downloading. |
outdir |
The output directory. |
arrayjobs |
A character specify the number of array you try to run, i.e. 1-100. |
jobid |
The job name show up in your sq NAME column. |
see more detail about SRA with Aspera downloading: http://www.ncbi.nlm.nih.gov/books/NBK158899/#SRA_download.downloading_sra_data_using
return a batch of shell scripts.
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