yigbt/multiGSEA: Combining GSEA-based pathway enrichment with multi omics data integration

Extracted features from pathways derived from 8 different databases (KEGG, Reactome, Biocarta, etc.) can be used on transcriptomic, proteomic, and/or metabolomic level to calculate a combined GSEA-based enrichment score.

Getting started

Package details

Bioconductor views BioCarta GeneSetEnrichment Pathways Reactome
Maintainer
LicenseGPL-3
Version1.7.1
URL https://github.com/yigbt/multiGSEA
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("yigbt/multiGSEA")
yigbt/multiGSEA documentation built on May 5, 2022, 1:01 p.m.