getOrganisms: Get list of supported organisms

View source: R/feature_processing.R

getOrganismsR Documentation

Get list of supported organisms

Description

Get a list of organisms that are covered in our workflow through a supporting 'AnnotationDBi' package. Without such a package we would not be able to map transcript and protein identifier between different formats. All the organisms that are listed here have at lest kegg and or reactome pathway annotation that can be queried by 'graphite'.

Usage

getOrganisms()

Value

List of supported organisms

Examples

getOrganisms()

yigbt/multiGSEA documentation built on May 5, 2022, 1:01 p.m.