viewGeneViolin: viewGeneViolin

Description Usage Arguments Examples

Description

View violin plots

Usage

1
viewGeneViolin(object, gene.name, groups)

Arguments

gene.name

character name of the gene to plot. Must be same names use in rownames()

groups

optional grouping factor to be used in place of clusters

sce

object of the SingleCellExperiment class.

Examples

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viewGeneViolin(sce,"Penk")
viewGeneViolin(sce,"Penk",groups=custom.groups) # custom.groups must be a factor variable

zhongmicai/bigSCale2_singleCell documentation built on Nov. 5, 2019, 1:26 p.m.