viewSignatures: atures

Description Usage Arguments Examples

Description

Plots and heatmap with dendrogram, clusters, pseudotime, transcriptome complexity, custom user colData and expression values for markers and signtures.

Usage

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viewSignatures(object, selected.cluster)

Arguments

sce

object of the SingleCellExperiment class.

Examples

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viewSignatures(sce) # plots all the signatures of correlated markers
viewSignatures(sce,selected.cluster=1) # plots the markers (of all specificity levels) of cluster 1

zhongmicai/bigSCale2_singleCell documentation built on Nov. 5, 2019, 1:26 p.m.