pairwise.neifst: Estimates pairwise FSTs according to Nei (1987)
In hierfstat: Estimation and Tests of Hierarchical F-Statistics
pairwise.neifst R Documentation
Estimates pairwise FSTs according to Nei (1987)
Description
Estimate pairwise FSTs according to Nei (1987)
Usage
pairwise.neifst(dat,diploid=TRUE)
Arguments
dat
A data frame containing population of origin as the first column and
multi-locus genotypes in following columns
diploid
whether the data is from a diploid (default) or haploid organism
Details
FST are calculated using Nei (87) equations for FST', as described in the note
section of basic.stats
Value
A matrix of pairwise FSTs
Author(s)
Jerome Goudet jerome.goudet@unil.ch
References
Nei, M. (1987) Molecular Evolutionary Genetics. Columbia University Press
See Also
pairwise.WCfst genet.dist basic.stats
Examples
data(gtrunchier)
pairwise.neifst(gtrunchier[,-2],diploid=TRUE)
hierfstat documentation built on May 6, 2022, 1:05 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| pairwise.neifst | R Documentation |
Estimates pairwise FSTs according to Nei (1987)
Description
Estimate pairwise FSTs according to Nei (1987)
Usage
pairwise.neifst(dat,diploid=TRUE)
Arguments
dat |
A data frame containing population of origin as the first column and multi-locus genotypes in following columns |
diploid |
whether the data is from a diploid (default) or haploid organism |
Details
FST are calculated using Nei (87) equations for FST', as described in the note section of basic.stats
Value
A matrix of pairwise FSTs
Author(s)
Jerome Goudet jerome.goudet@unil.ch
References
Nei, M. (1987) Molecular Evolutionary Genetics. Columbia University Press
See Also
pairwise.WCfst genet.dist basic.stats
Examples
data(gtrunchier) pairwise.neifst(gtrunchier[,-2],diploid=TRUE)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.