pick.high.conc: Select the highest concentration from serialy diluted samples

In RPPanalyzer: Reads, Annotates, and Normalizes Reverse Phase Protein Array Data

Description

Picks the dilution step with the value 1 from serialy diluted samples in an RPPA data set.

Usage

   pick.high.conc(x, highest = ("dilution"), sample.id=c("sample","sample.n"))

Arguments

x	Any RPPA data list with 4 elements
highest	Character string describing the column that contains the dilution steps
sample.id	Attributes to identify the samples

Details

The function selects all spots or samples from a RPPA data set with the value 1 in the column of the sampledescription denoted in argument highest.

Value

An RPPA data list containing only the samples with the highest concentration of each dilution series.

Author(s)

Heiko Mannsperger <[e-mail]>, Stephan Gade <[e-mail]>

Examples

   library(RPPanalyzer)
   data(ser.dil.samples)

   dataHighcon <- pick.high.conc(ser.dil.samples,highest="dilution")

RPPanalyzer documentation built on May 2, 2019, 6:10 p.m.