epiG: Fit an epiG model

In epiG: DNA methylation and SNP calling for bisulfite sequencing data

Description

Fit an epiG model

Usage

  epiG(filename, refname, start, end, max_threads = 8L,
    config, refGenom_filename = config$ref.filename,
    altGenom_filename = config$alt.filename)

Arguments

filename	BAM file with aligned and ordered reads
refGenom_filename
altGenom_filename
refname
start
end
max_threads
config

Value

fitted model

Author(s)

Martin Vincent

epiG documentation built on May 2, 2019, 6:49 p.m.