addGadaToAromaAffymetrix: Connect gada and aroma.affymetrix packages

In gada: Genome Alteration Detection Algorithm (GADA)

Description

Defines the GadaModel object and methods for calling GADA from within the aroma.affymetrix package framework.

Usage

addGadaToAromaAffymetrix()

Details

This function loads the Aroma.Affymetrix package if not loaded already, and creates the GadaModel object and methods such that we can use the gada package from within the aroma.affymetrix package.

See the example in the gada user manual for more information, and the aroma.affymetrix package documentation.

Value

No return value, just prepares gada to be used under aroma.affymetrix package

References

Pique-Regi R, Caceres A, Gonzalez JR. "R-Gada: a package for fast detection and visualization of copy number alterations on multiple samples", BMC Bioinformatics , Submitted Nov 2009

gada documentation built on May 2, 2019, 6:10 p.m.