splitDataBeadStudio: Split BeadStudio data

In gada: Genome Alteration Detection Algorithm (GADA)

Description

This function split a file obtained from BeadStudio into different files corresponding to each individual

Usage

splitDataBeadStudio(file, Samples, NumCols, verbose = TRUE)

Arguments

file	An unique BeadStudio file containing information for all samples
Samples	The number of individuals
NumCols	The number of Columns for each individual
verbose	Should information about process be printed in the console? The default is TRUE

References

Pique-Regi R, Caceres A, Gonzalez JR. "R-Gada: a package for fast detection and visualization of copy number alterations on multiple samples", BMC Bioinformatics , Submitted Nov 2009

See Also

setupGADAIllumina

Examples

## Not run: 
# get data
download.file("http://www.creal.cat/jrgonzalez/GADA/exampleBeadStudio.txt","./exampleBeadStudio.txt")

splitDataBeadStudio("exampleBeadStudio.txt",Samples=8,NumCols=5)


## End(Not run)

gada documentation built on May 2, 2019, 6:10 p.m.