syntren1000.data: Simulated Gene Expression Data

In grndata: Synthetic Expression Data for Gene Regulatory Network Inference

Description

Dataset containing 1000 samples and 1000 genes generated by the publicly available SynTReN generator using an ecoli source network.

Usage

data(syntren1000.data)

Format

syntren1000.data is a data frame containing 1000 rows and 1000 columns. Each row contains a simulated microarray experiment and each column contains a gene.

Value

data.frame containg the data.

Source

SynTReN 1.1.3 with source network : ecoli\_nn.sif

References

Van den Bulcke, Tim, et al. "SynTReN: a generator of synthetic gene expression data for design and analysis of structure learning algorithms." BMC Bioinformatics 7.1 (2006): 43.

See Also

gnw1565.data, gnw2000.data, rogers1000.data, syntren300.data

Examples

    data(syntren1000.data)
    # Print size
    print(dim(syntren1000.data))

Example output

[1] 1000 1000

grndata documentation built on May 2, 2019, 4:53 p.m.