gnw2000.net: Simulated Gene Expression Data

In grndata: Synthetic Expression Data for Gene Regulatory Network Inference

Description

True underlying network used to generate the dataset at gnw2000.data.

Usage

data(gnw2000.net)

Format

true.net is the true underlying network used to generate the dataset loaded at gnw2000.data.

Value

matrix containg underlying network.

Source

GNW v3.1 with source network : Yeast

References

Schaffter, Thomas, Daniel Marbach, and Dario Floreano. "GeneNetWeaver: in silico benchmark generation and performance profiling of network inference methods." Bioinformatics 27.16 (2011): 2263-2270.

See Also

gnw2000.data, gnw1565.data, rogers1000.data, syntren300.data, syntren1000.data

Examples

    data(gnw2000.net)
    # Number of directed edges
    nEdges<- sum(gnw2000.net)

Example output

grndata documentation built on May 2, 2019, 4:53 p.m.