syntren300.net: Simulated Gene Expression Data

In grndata: Synthetic Expression Data for Gene Regulatory Network Inference

Description

True underlying network used to generate the dataset at syntren300.data.

Usage

data(syntren300.net)

Format

true.net is the true underlying network used to generate the dataset loaded at syntren300.data.

Value

matrix containg underlying network.

Source

SynTReN 1.1.3 with source network : ecoli\_nn.sif

References

Van den Bulcke, Tim, et al. "SynTReN: a generator of synthetic gene expression data for design and analysis of structure learning algorithms." BMC bioinformatics 7.1 (2006): 43.

See Also

syntren300.data, syntren1000.data, rogers1000.data, gnw1565.data, gnw2000.data

Examples

    data(syntren300.net)
    # Number of directed edges
    nEdges<-sum(syntren300.net)

Example output

grndata documentation built on May 2, 2019, 4:53 p.m.