toy.data: Simulated Toy example of Gene Expression Data

In grndata: Synthetic Expression Data for Gene Regulatory Network Inference

Description

Dataset containing 64 samples and 64 genes generated by the publicly available GNW generator using an ecoli source network.

Usage

data(toy.data)

Format

toy.data is a data frame containing 64 rows and 64 columns. Each row contains a simulated microarray experiment and each column contains a gene.

Value

data.frame containg the data.

Source

GNW v3.1 with source network : Example (Ecoli)

References

Schaffter, Thomas, Daniel Marbach, and Dario Floreano. "GeneNetWeaver: in silico benchmark generation and performance profiling of network inference methods." Bioinformatics 27.16 (2011): 2263-2270.

See Also

toy.net

Examples

    data(toy.data)
    # Print size
    print(dim(toy.data))

Example output

[1] 64 64

grndata documentation built on May 2, 2019, 4:53 p.m.