Tools for an information-theoretic approach to estimating the probability of continuous character transitions on phylogenetic trees
|Author||Andrew Hipp <firstname.lastname@example.org>, with contributions from Marcial Escudero|
|Date of publication||2014-03-03 08:29:55|
|Maintainer||Andrew Hipp <email@example.com>|
carex: Carex section Ovales tree, chromosome data, and nodes
informationCriterion: Information criterion and weights for a set of models
isMonophyletic: Test whether a set of taxa is monophyletic on an ouch-style...
multiModel: Test multiple models of character transition at a single node
ouSim: Discrete-time simulation of Ornstein-Uhlenbeck models on a...
paintBranches: Paint branches for Ornstein-Uhlenbeck analysis
plot.ouSim: Visualizing discrete-time simulation of Ornstein-Uhlenbeck...
regimeMaker: Paint ouch-style regimes over a set of trees based on a...
regimeMatrix: Create a matrix that defines models for batch analysis
regimeVectors: Paint all possible regimes
runBatchHansen: Analyze Ornstein-Uhlenbeck models over a set of trees
summary.hansenBatch: Summarize output from runBatchHansen