Description Usage Arguments Details Value Author(s) See Also
View source: R/summarizingAnalyses.R
summary.hansenBatch
is a summary method for a hansenBatch
object.
print.hansenSummary
is a print method for a hansenSummary
object.
1 2 3 4 |
object |
Output from |
ic |
Choice of information criterion to use in model-averaging of parameters. Choices are |
x |
Output from |
... |
Additional arguments to |
summary.hansenBatch
averages parameters over models and over trees, and provides the cumulative
information-criterion weight for models containing each node as an estimate of the support for the hypothesis
that there was a character shift at that node.
print.hansenSummary
provides an easy-to-read synopsis of the analysis summary. Called automatically when you simply type
in the name of the summary object.
For summary.hansenBatch
, a list of class hansenSummary
with the following items:
modelsMatrix |
A list of matrices, indexed by tree, providing the information criterion weights for each model. |
nodeWeightsMatrix |
A list of length two with two matrices:
|
modelAvgAlpha |
The model-averaged estimate of |
modelAvgSigmaSq |
The model-averaged estimate of |
thetaMatrix |
A matrix with trees as the rows, branch number as the columns, containing the model-averaged value of |
Andrew Hipp ahipp@mortonarb.org
carex
for an example
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