Paints branches with regimes changing at nodes specified. Called by
paintBranches(regimeShiftNodes, tree, regimeTitles)
Either a vector of nodes (by number) at which the selective regime changes, or a list of taxa defining nodes. This allows you to use paintBranches with the same nodes you use to call runBatchHansen. This parameter may include the root but does not need to.
Titles for the regimes.
regimeTitles is a vector of titles for the regimes that begin at the root and at the nodes indicated in
regimeShiftNodes in order of description in "regimeShiftNodes", except that the root is listed first in
regimeTitles but may not be included at all in
A regime in which shifts in optimum are coded as occuring at all nodes specified in
The regime is formated to input directly into
Andrew Hipp [email protected]
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