Man pages for maticce
Mapping Transitions in Continuous Character Evolution
| carex | Carex section Ovales tree, chromosome data, and nodes |
| informationCriterion | Information criterion and weights for a set of models |
| isMonophyletic | Test whether a set of taxa is monophyletic on an ouch-style... |
| multiModel | Test multiple models of character transition at a single node |
| ouSim | Discrete-time simulation of Ornstein-Uhlenbeck models on a... |
| paintBranches | Paint branches for Ornstein-Uhlenbeck analysis |
| plot.ouSim | Visualizing discrete-time simulation of Ornstein-Uhlenbeck... |
| regimeMaker | Paint ouch-style regimes over a set of trees based on a... |
| regimeMatrix | Create a matrix that defines models for batch analysis |
| regimeVectors | Paint all possible regimes |
| runBatchHansen | Analyze Ornstein-Uhlenbeck models over a set of trees |
| summary.hansenBatch | Summarize output from runBatchHansen |
