Files in opm
Analysing Phenotype Microarray and Growth Curve Data

DESCRIPTION
NAMESPACE
COPYING
NEWS
ChangeLog
tests/run-all.R
build/vignette.rds
inst/CITATION
inst/scripts/run_opm.R
inst/testdata/Example_3.csv.xz
inst/testdata/Example_Old_Style_Multiple.csv.xz
inst/testdata/Example_Old_Style_2.csv.xz
inst/testdata/Example_TECAN.txt.xz
inst/testdata/Example_1.csv.xz
inst/testdata/Example_2.csv.xz
inst/testdata/Example_Old_Style_1.csv.xz
inst/testdata/Example_Perkin_Elmer.txt.xz
inst/testdata/Example_Old_Style_3.csv.xz
inst/testdata/Example_Ecoplate.csv.xz
inst/testdata/Example_LIMS_Export.exl.xz
inst/testdata/Example_ID_run.csv.xz
inst/doc/opm-substrates.Rnw
inst/doc/opm-tutorial.Rnw
inst/doc/opm-tutorial.pdf inst/doc/opm-substrates.pdf
inst/doc/opm-growth-curves.Rnw
inst/doc/opm-growth-curves.pdf
inst/auxiliary/styles_1.css
inst/auxiliary/002_rdbms_create.sql
inst/auxiliary/001_rdbms_drop.sql
inst/auxiliary/003_rdbms_delete.sql
inst/tests/test_imports.R inst/tests/test_classes-aux.R inst/tests/test_package.R inst/tests/test_plotting.R inst/tests/test_testing-aux.R inst/tests/test_substrate-info.R inst/tests/test_naming.R inst/tests/test_splinefit-aux.R inst/tests/test_aggregation.R inst/tests/test_plotting-aux.R inst/tests/test_discretization.R inst/tests/test_metadata.R inst/tests/test_conversion-aux.R inst/tests/test_aggregation-aux.R inst/tests/test_dbio-aux.R inst/tests/test_well-map.R inst/tests/test_getter.R inst/tests/test_data.R inst/tests/test_plate-map.R inst/tests/test_conversion.R inst/tests/test_io.R inst/tests/test_combination-aux.R inst/tests/test_multcomp.R inst/tests/test_phylogeny-aux.R inst/tests/test_dbio.R inst/tests/test_io-aux.R inst/tests/test_classes.R inst/tests/test_constants.R inst/tests/test_naming-aux.R inst/tests/test_phylogeny.R inst/tests/test_auxiliary-aux.R inst/tests/test_combination.R inst/tests/test_auxiliary.R inst/tests/test_kmeans.R inst/tests/test_kmeans-aux.R inst/tests/test_multcomp-aux.R
vignettes/opm-growth-curves.Rnw
vignettes/opm-tutorial.Rnw
vignettes/opm-substrates.Rnw
R/constants.R R/combination-aux.R R/phylogeny.R R/naming.R R/multcomp.R R/io.R R/auxiliary-aux.R R/auxiliary.R R/dbio.R R/substrate-info.R R/classes.R R/classes-aux.R R/discretization.R R/conversion-aux.R R/multcomp-aux.R R/getter.R R/testing-aux.R R/phylogeny-aux.R R/aggregation.R R/combination.R R/conversion.R R/plotting.R R/plate-map.R R/aggregation-aux.R R/metadata.R R/kmeans-aux.R R/io-aux.R R/package.R R/plotting-aux.R R/naming-aux.R R/data.R R/well-map.R R/kmeans.R R/imports.R R/splinefit-aux.R R/dbio-aux.R demo/identify-positive-reactions.R demo/distinguish-curve-topologies.R demo/workshop-part-3.R demo/custom-PCA.R demo/workshop-part-2.R demo/phenotype-vs-genotype.R demo/workshop-part-1.R
demo/00Index
demo/cluster-with-pvalues.R demo/SQLite-IO.R demo/workshop-part-5.R demo/workshop-part-4.R demo/multiple-plate-types.R demo/MySQL-IO.R demo/PostgreSQL-IO.R demo/MongoDB-IO.R man/aggregated.Rd man/WMD.Rd man/opm.package.Rd man/plates.Rd man/do_disc.Rd man/vaas_4.Rd man/xy_plot.Rd man/dim.Rd man/has_aggr.Rd man/max.Rd man/set_spline_options.Rd man/c.Rd man/opm_mcp.Rd man/phylo_data.Rd man/separate.Rd man/find_substrate.Rd man/infix.k.Rd man/boccuto_et_al.Rd man/heat_map.Rd man/do_aggr.Rd man/as.data.frame.Rd man/bracket.Rd man/collect_template.Rd man/metadata.set.Rd man/bracket.set.Rd man/level_plot.Rd man/kmeans.Rd man/discretized.Rd man/opmx.function.Rd man/csv_data.Rd man/discrete.Rd man/metadata.Rd man/extract.Rd man/measurements.Rd man/ci_plot.Rd man/opm_dbput.Rd man/sort.Rd man/explode_dir.Rd man/include_metadata.Rd man/summary.Rd man/run_kmeans.Rd man/read_opm.Rd man/annotated.Rd man/OPM.Rd man/OPM_DB.Rd man/to_yaml.Rd man/plate_type.Rd man/opm_files.Rd man/duplicated.Rd man/subset.Rd man/opms.function.Rd man/html_args.Rd man/opm_opt.Rd man/infix.q.Rd man/potato.Rd man/radial_plot.Rd man/wells.Rd man/merge.Rd man/substrate_info.Rd man/parallel_plot.Rd man/batch_opm.Rd
data/boccuto_et_al.rda
data/vaas_1.rda
data/potato.rda
data/vaas_4.rda
opm documentation built on Nov. 17, 2017, 2:20 p.m.