Mapping species name to KEGG code
This function maps species name to KEGG code.
character, either the KEGG code, scientific name or the common name of the target species. Default species="hsa", it is equivalent to use either "Homo sapiens" (scientific name) or "human" (common name).
logical, should unmapped entris be removed. Default na.rm = FALSE.
logical, whether to extract KEGG species code only or with gene ID usage info too. Default , code.only = TRUE.
a character vector of mapped KEGG code of species.
Weijun Luo <email@example.com>
Luo, W. and Brouwer, C., Pathview: an R/Bioconductor package for pathway based data integration and visualization. Bioinformatics, 2013, 29(14): 1830-1831, doi: 10.1093/bioinformatics/btt285
korg the species and KEGG code mapping data,
cpd2kegg etc the auxillary compound ID mappers,
download.kegg the downloader function.
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