Files in pomp

Statistical Inference for Partially Observed Markov Processes

.Rinstignore

DESCRIPTION

NAMESPACE

inst/NEWS

inst/GPL

inst/TODO.md

inst/CITATION

inst/NEWS.Rd

inst/doc/index.html

inst/include/pomp.h

inst/examples/bbs.R inst/examples/euler.sir.R inst/examples/ricker.R inst/examples/rw2.R inst/examples/gillespie.sir.R inst/examples/gompertz.R inst/examples/blowflies.R inst/examples/dacca.R inst/examples/ou2.R demo/rw2.R demo/sir.R demo/gompertz.R demo/logistic.R

demo/00Index

R/builder.R R/nlf-funcs.R R/rmeasure-pomp.R R/spect-match.R R/pfilter-methods.R R/logmeanexp.R R/abc.R R/nlf-objfun.R R/dprior-pomp.R R/probe.R R/aaa.R R/pfilter.R R/csnippet.R R/nlf.R R/pomp-methods.R R/slice-design.R R/probe-match.R R/plugins.R R/init-state-pomp.R R/abc-methods.R R/simulate-pomp.R R/dprocess-pomp.R R/pomp-class.R R/bsplines.R R/mif2.R R/skeleton-pomp.R R/authors.R R/pomp.R R/trajectory-pomp.R R/bsmc2.R R/pmcmc.R R/profile-design.R R/dmeasure-pomp.R R/nlf-guts.R R/sannbox.R R/spect.R R/bsmc.R R/minim.R R/proposals.R R/mif2-methods.R R/load.R R/parmat.R R/plot-pomp.R R/pmcmc-methods.R R/rprior-pomp.R R/pomp-fun.R R/sobol.R R/mif.R R/generics.R R/basic-probes.R R/traj-match.R R/example.R R/mif-methods.R R/eulermultinom.R R/rprocess-pomp.R

src/rprocess.c

src/mif2.c

src/bspline.c

src/gompertz.c

src/dprior.c

src/probe_acf.c

src/pomp.h

src/simulate.c

src/probe_nlar.c

src/userdata.c

src/initstate.c

src/blowfly.c

src/eulermultinom.c

src/dsobol.c

src/R_init_pomp.c

src/sir.c

src/euler.c

src/SSA.f90

src/partrans.c

src/trajectory.c

src/dmeasure.c

src/rmeasure.c

src/pomp_internal.h

src/pomp_mat.h

src/synth_lik.c

src/probe.c

src/mif.c

src/dprocess.c

src/tsir.c

src/pomp_fun.c

src/Makevars

src/ricker.c

src/sobol.f

src/SSA_wrapper.c

src/lpa.c

src/rprior.c

src/skeleton.c

src/pfilter.c

src/ou2.c

src/cholmodel.c

src/lookup_table.c

src/probe_marginal.c

man/particles-mif.Rd man/abc.Rd man/measles.Rd man/bsplines.Rd man/rw2.Rd man/csnippet.Rd man/example.Rd man/gompertz.Rd man/nlf.Rd man/proposals.Rd man/bsmc.Rd man/pomp-fun.Rd man/pmcmc.Rd man/mif2.Rd man/design.Rd man/pomp-methods.Rd man/eulermultinom.Rd man/probe.Rd man/sir.Rd man/parmat.Rd man/spect.Rd man/mif.Rd man/blowflies.Rd man/builder.Rd man/simulate-pomp.Rd man/ou2.Rd man/plugins.Rd man/traj-match.Rd man/ricker.Rd man/basic-probes.Rd man/logmeanexp.Rd man/package.Rd man/pomp.Rd man/pfilter.Rd man/lowlevel.Rd man/dacca.Rd man/sannbox.Rd build/pomp.pdf tests/bbs.R

tests/ou2-bsmc2.Rout.save

tests/ou2-mif-fp.Rout.save

tests/rw2.Rout.save

tests/ou2-nlf.R tests/ou2-mif2.R

tests/dacca.Rout.save

tests/ou2-probe.Rout.save

tests/pfilter.R tests/partrans.R

tests/gompertz.Rout.save

tests/ou2-spect.Rout.save

tests/ricker.R

tests/skeleton.Rout.save

tests/dimchecks.R

tests/ricker-probe.Rout.save

tests/getting_started.Rout.save

tests/getting_started.R

tests/ou2-forecast.Rout.save

tests/fhn.R tests/gillespie.R tests/ou2-forecast.R tests/rw2.R

tests/logistic.Rout.save

tests/ou2-abc.R tests/ricker-probe.R tests/steps.R

tests/ricker-spect.Rout.save

tests/bbs-trajmatch.R tests/sir.R

tests/dimchecks.Rout.save

tests/bbs.Rout.save

tests/ou2-bsmc2.R

tests/ou2-nlf.Rout.save

tests/ricker-spect.R tests/ou2-procmeas.R tests/gompertz.R tests/logistic.R

tests/prior.Rout.save

tests/skeleton.R tests/ou2-mif-fp.R tests/demos.R

tests/ou2-bsmc.Rout.save

tests/ou2-pmcmc.R tests/ou2-simulate.R

tests/ou2-simulate.Rout.save

tests/fhn.Rout.save

tests/steps.Rout.save

tests/ou2-pmcmc.Rout.save

tests/blowflies.R tests/ou2-spect.R tests/ou2-kalman.R

tests/ou2-abc.Rout.save

tests/gillespie.Rout.save

tests/ou2-trajmatch.R

tests/ricker.Rout.save

tests/ou2-mif.Rout.save

tests/ou2-kalman.Rout.save

tests/ou2-probe.R tests/filtfail.R tests/ou2-mif.R

tests/partrans.Rout.save

tests/synlik.Rout.save

tests/sir.Rout.save

tests/pomppomp.Rout.save

tests/ou2-mif2.Rout.save

tests/ricker-bsmc.Rout.save

tests/ou2-bsmc.R tests/pomppomp.R tests/ricker-bsmc.R tests/prior.R

tests/ou2-trajmatch.Rout.save

tests/dacca.R

tests/ou2-procmeas.Rout.save

tests/bbs-trajmatch.Rout.save

tests/pfilter.Rout.save

tests/blowflies.Rout.save

tests/filtfail.Rout.save

tests/synlik.R

data/LondonYorke.rda

data/ewcitmeas.rda

data/ewmeas.rda

pomp documentation built on May 2, 2019, 4:09 p.m.