fitnessReport: Fitness Report

Description Arguments Value

View source: R/reports.R

Description

Summarises mean and median fitnesses for all orfs in qfa.fit object, and writes them to file with an appropriate header.

Arguments

treatment

Fitnesses are filtered by this value in the qfa.fit treatment column before summaries are generated.

outputfile

Output file name.

dataframe

Dataframe containing fitnesses to be summarised. Typically output from qfa.fit function. Must add a "fit" column before passing to this function.

fdef

Fitness definition used (e.g. "nAUC","MDR","r").

Value

Writes summary fitnesses to file with header containing some metadata.


qfa documentation built on Feb. 22, 2020, 3:01 a.m.

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