as.matrix.alignment: as.matrix.alignment
In seqinr: Biological Sequences Retrieval and Analysis
View source: R/as.matrix.alignment.R
as.matrix.alignment R Documentation
as.matrix.alignment
Description
Converts an alignment into a matrix of characters
Usage
## S3 method for class 'alignment'
as.matrix(x, ...)
Arguments
x
an object of the class alignment.
...
additional arguments to be passed to or from methods.
Value
A matrix of characters.
Author(s)
J.R. Lobry
See Also
read.alignment
Examples
phylip <- read.alignment(file = system.file("sequences/test.phylip",
package = "seqinr"), format = "phylip")
as.matrix(phylip)
seqinr documentation built on March 31, 2023, 3:05 p.m.
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View source: R/as.matrix.alignment.R
| as.matrix.alignment | R Documentation |
as.matrix.alignment
Description
Converts an alignment into a matrix of characters
Usage
## S3 method for class 'alignment'
as.matrix(x, ...)
Arguments
x |
an object of the class alignment. |
... |
additional arguments to be passed to or from methods. |
Value
A matrix of characters.
Author(s)
J.R. Lobry
See Also
read.alignment
Examples
phylip <- read.alignment(file = system.file("sequences/test.phylip",
package = "seqinr"), format = "phylip")
as.matrix(phylip)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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