Files in seqinr
Biological Sequences Retrieval and Analysis

DESCRIPTION
NEWS
NAMESPACE
man/isenum.Rd man/caitab.Rd man/gbk2g2.Rd man/readsmj.Rd man/SeqAcnucWeb.Rd man/ECH.Rd man/plotladder.Rd man/gbk2g2.euk.Rd man/extract.breakpoints.Rd man/n2s.Rd man/dotchart.uco.Rd man/write.fasta.Rd man/as.matrix.alignment.Rd man/read.abif.Rd man/parser.socket.Rd man/phylip.Rd man/m16j.Rd man/rearranged.oriloc.Rd man/amb.Rd man/pK.Rd man/seqinr-package.Rd man/as.alignment.Rd man/readfirstrec.Rd man/aaindex.Rd man/get.ncbi.Rd man/readBins.Rd man/pmw.Rd man/oriloc.Rd man/c2s.Rd man/AAstat.Rd man/read.alignment.Rd man/splitseq.Rd man/words.Rd man/lseqinr.Rd man/al2bp.Rd man/alllistranks.Rd man/getliststate.Rd man/getFrag.Rd man/plotabif.Rd man/permutation.Rd man/words.pos.Rd man/gb2fasta.Rd man/prepgatannots.Rd man/gs500liz.Rd man/s2c.Rd man/ucoweight.Rd man/AnoukResult.Rd man/gcT.Rd man/savelist.Rd man/peakabif.Rd man/test.co.recstat.Rd man/stresc.Rd man/countfreelists.Rd man/toycodon.Rd man/draw.recstat.Rd man/print.qaw.Rd man/choosebank.Rd man/modifylist.Rd man/baselineabif.Rd man/computePI.Rd man/prettyseq.Rd man/identifiler.Rd man/crelistfromclientdata.Rd man/autosocket.Rd man/print.SeqAcnucWeb.Rd man/JLO.Rd man/getKeyword.Rd man/getlistrank.Rd man/getTrans.Rd man/syncodons.Rd man/tablecode.Rd man/cai.Rd man/kaks.Rd man/ghelp.Rd man/getSequence.Rd man/chargaff.Rd man/comp.Rd man/trimSpace.Rd man/getName.Rd man/dinucl.Rd man/GC.Rd man/draw.oriloc.Rd man/SeqFastadna.Rd man/count.Rd man/where.is.this.acc.Rd man/dist.alignment.Rd man/ec999.Rd man/revaligntest.Rd man/getLocation.Rd man/setlistname.Rd man/EXP.Rd man/mase.Rd man/bma.Rd man/getAnnot.Rd man/test.li.recstat.Rd man/col2alpha.Rd man/clustal.Rd man/closebank.Rd man/plotPanels.Rd man/recstat.Rd man/rot13.Rd man/circle.Rd man/query.Rd man/aaa.Rd man/acnucopen.Rd man/draw.rearranged.oriloc.Rd man/a.Rd man/gfrag.Rd man/gcO2.Rd man/msf.Rd man/stutterabif.Rd man/getType.Rd man/aacost.Rd man/fasta.Rd man/swap.Rd man/plot.SeqAcnucWeb.Rd man/extractseqs.Rd man/translate.Rd man/kaks-torture.Rd man/waterabs.Rd man/s2n.Rd man/residuecount.Rd man/read.fasta.Rd man/consensus.Rd man/SeqFrag.Rd man/readPanels.Rd man/zscore.Rd man/knowndbs.Rd man/uco.Rd man/get.db.growth.Rd man/getLength.Rd man/move.Rd man/synsequence.Rd man/toyaa.Rd man/reverse.align.Rd man/SeqFastaAA.Rd man/fastacc.Rd man/prochlo.Rd man/SEQINR.UTIL.Rd man/countsubseqs.Rd man/dia.bactgensize.Rd man/dotPlot.Rd man/figures/introduction-dbg.pdf man/figures/gcskewmbe96.pdf man/figures/lncs2004.pdf
man/figures/chargaff.png
man/figures/waterabs.jpg
man/figures/aka.pdf
data/phylip.RData
data/gcO2.rda
data/gs500liz.RData
data/caitab.RData
data/msf.RData
data/dinucl.RData
data/datalist
data/fasta.RData
data/kaksTorture.RData
data/m16j.RData
data/aaindex.RData
data/EXP.RData
data/toyaa.RData
data/identifiler.RData
data/prochlo.RData
data/gcT.rda
data/sysdata.rda
data/aacost.RData
data/mase.RData
data/ECH.RData
data/SEQINR.UTIL.RData
data/pK.RData
data/JLO.RData
data/revaligntest.RData
data/waterabs.RData
data/chargaff.RData
data/toycodon.RData
data/clustal.RData
data/ec999.RData
data/AnoukResult.RData
inst/CITATION
inst/sequences/test.aln
inst/sequences/UBIQUITIN.mase
inst/sequences/bordetella.fasta
inst/sequences/scuco.txt
inst/sequences/smallAA.fasta
inst/sequences/test.mase
inst/sequences/bb.sp
inst/sequences/ecolicgpe5.fasta
inst/sequences/gopher.names
inst/sequences/malM.fasta
inst/sequences/humanMito.fasta
inst/sequences/someORF.fsa
inst/sequences/test.phylip
inst/sequences/ct.gbk.gz
inst/sequences/input.dat
inst/sequences/kaks-torture.fasta
inst/sequences/ct.predict
inst/sequences/legacy.fasta
inst/sequences/test.msf
inst/sequences/ortho.fasta
inst/sequences/smallAA.fasta.gz
inst/sequences/bb.acc
inst/sequences/louse.names
inst/sequences/ECOUNC.fsa
inst/sequences/input.out
inst/sequences/Anouk.fasta
inst/sequences/ame1.gbk
inst/sequences/gopher.fasta
inst/sequences/bb.kwd
inst/sequences/ct.bfa
inst/sequences/bordetella.pep.aln
inst/sequences/DarrenObbard.fasta
inst/sequences/hannah.txt
inst/sequences/seqAA.fasta
inst/sequences/bb.mne
inst/sequences/louse.fasta
inst/sequences/ct.fasta.gz
inst/abif/2_FAC321_0000205983_B02_004.fsa
inst/abif/AmpFLSTR_Panels_v1.txt
inst/abif/Promega_Panels_v1.txt
inst/abif/1_0000206138_C01_005.fsa
inst/abif/Promega_Bins_v1.txt
inst/abif/AmpFLSTR_Bins_v1.txt
inst/abif/samplefsa2ps.fsa
inst/abif/2_0000206138_C01_005.fsa
inst/abif/Prototype_PowerPlex_EP01_Bins.txt
inst/abif/NGM_Pa.txt
inst/abif/NGM_Bins.txt
inst/abif/Prototype_PowerPlex_EP01_Pa.txt
inst/abif/1_FAC321_0000205983_B02_004.fsa
src/alignment.c
src/Makevars.win
src/packagename_init.c
src/zsockr.c
src/util.c
src/Makevars
src/fastacc.c
src/getzlibsock.c
src/alignment.h
src/kaks.c
R/col2alpha.R R/readfirstrec.R R/getliststate.R R/autosocket.R R/synonymous.R R/zscore.R R/getName.R R/test.li.recstat.R R/move.R R/acnucopen.R R/get.ncbi.R R/amb.R R/draw.recstat.R R/permutation.R R/parser.socket.R R/cai.R R/getAnnot.R R/modifylist.R R/read.alignment.R R/splitseq.R R/plot.SeqAcnucWeb.R R/gfrag.R R/gbk2g2.euk.R R/gbk2g2.R R/swap.R R/dist.alignment.R R/translate.R R/getLocation.R R/al2bp.R R/reverse.align.R R/closebank.R R/oriloc.R R/getLength.R R/kaks.R R/where.is.this.acc.R R/prepgetannots.R R/as.matrix.alignment.R R/allistranks.R R/baselineabif.R R/plotladder.R R/uco.R R/dia.bactgensize.R R/clfcd.R R/trimSpace.R R/comp.R R/write.fasta.R R/as.alignment.R R/rearranged.oriloc.R R/getTrans.R R/bma.R R/getType.R R/ghelp.R R/db.growth.R R/getFrag.R R/acnucclose.R R/extractseqs.R R/words.pos.R R/dotPlot.R R/draw.oriloc.R R/plotPanels.R R/stutterabif.R R/residuecount.R R/countfreelists.R R/knowndbs.R R/query.r R/plotabif.R R/getKeyword.R R/rot13.R R/test.co.recstat.R R/lseqinr.R R/rho.R R/words.R R/choosebank.R R/PI.R R/AAstat.R R/savelist.R R/GC.R R/countsubseqs.R R/peakabif.R R/pmw.R R/clientid.R R/readPanels.R R/getSequence.R R/setlistname.R R/circle.R R/consensus.R R/count.R R/prettyseq.R R/read.fasta.R R/recstat.R R/readsmj.R R/quitacnuc.R R/dotchart.uco.R R/util.R R/stresc.R R/tablecode.R R/ClassSeq.R R/getlistrank.R R/extract.breakpoints.R R/gb2fasta.R R/read.abif.R R/R_socket.R R/draw.rearranged.oriloc.R R/isenum.R R/s2n.R R/fastacc.R R/readBins.R
seqinr documentation built on Aug. 13, 2017, 3:01 a.m.