identifiler: Identifiler allele names

In seqinr: Biological Sequences Retrieval and Analysis

Identifiler allele names

Description

Names of the alleles in the Applied Biosystem identifiler allelic ladder.

Usage

data(identifiler)

Format

A list with 4 components for the four fluorochromes.

FAM

a list of 4 loci

VIC

a list of 5 loci

NED

a list of 4 loci

PET

a list of 3 loci

Examples

data(identifiler)
op <- par(no.readonly = TRUE)
par(mar = c(3,8,4,2)+0.1)
allcount <- unlist(lapply(identifiler, function(x) lapply(x, length)))
barplot(allcount[order(allcount)], horiz = TRUE, las = 1,
main = "Allele count per locus", col = "lightblue")
par(op)

seqinr documentation built on March 31, 2023, 3:05 p.m.