plot.slidWin: Plot a 'slidWin' object

In spider: Species Identity and Evolution in R

Description

Graphical representation of the summary statistics derived from slideAnalyses and slideBoxplots

Usage

## S3 method for class 'slidWin'
plot(x, outliers = FALSE, ...)

Arguments

x	An object of class ‘slidWin’.
outliers	Logical. When the results of slideBoxplots are being called, should the outliers be plotted? Default of FALSE.
...	Other arguments to be passed to plot.

Details

When boxplots of methods nonCon and interAll, the y-axis limits are constrained to the midpoint of the range covered by the boxplots, so that the intra-specific variation can be seen.

Value

Plots graphs depending on the options given to slideAnalyses or slideBoxplots.

Author(s)

Samuel Brown <[e-mail]>

See Also

slideAnalyses, slideBoxplots.

Examples

data(dolomedes)
doloSpp <- substr(dimnames(dolomedes)[[1]], 1, 5)

doloSlide <- slideAnalyses(dolomedes,  doloSpp, 200, interval=10, treeMeasures=TRUE)

plot(doloSlide)

doloBox <- slideBoxplots(dolomedes,  doloSpp, 200, interval=10, method="overall")

plot(doloBox)


data(anoteropsis)
anoSpp <- sapply(strsplit(dimnames(anoteropsis)[[1]], split="_"), 
    function(x) paste(x[1], x[2], sep="_"))

anoBox <- slideBoxplots(anoteropsis,  anoSpp, 200, interval=10, method="interAll")

plot(anoBox)
plot(anoBox, outliers=TRUE)

spider documentation built on May 2, 2019, 5:16 p.m.