getMonteCarloReplicate-method: getMonteCarloReplicate
In ALDEx2: Analysis Of Differential Abundance Taking Sample Variation Into Account

Description Usage Arguments Details Value See Also Examples

Returns a single Monte Carlo Dirochlet replicate generated from analysis, for an aldex.clr object.

1	getMonteCarloReplicate(.object,i)

`.object`	A `aldex.clr` object containing the Monte Carlo Dirochlet replicates derived from estimating the technical variance of the raw read count data, along with sample and feature information.
`i`	The numeric index of the desired replicate.

Returns the designated Monte Carlo Dirochlet replicate generated from analysis.

A data frame representing the designated Monte Carlo Dirochlet replicate generated from analysis.

aldex.clr

data(selex)
    #subset for efficiency
    selex <- selex[1201:1600,]
conds <- c(rep("NS", 7), rep("S", 7))
x <- aldex.clr(selex, conds, mc.samples = 2, denom = "all", verbose = FALSE)
monteCarloReplicate <- getMonteCarloReplicate(x,1)