Returns the number of conditions compared for analysis, for an aldex.clr object.
A aldex.clr object containing the Monte Carlo Dirochlet instances derived from estimating the technical variance of the raw read count data, along with sample and feature information.
Returns the number of conditions compared.
A numeric representing the number of conditions compared.
#subset for efficiency
selex <- selex[1201:1600,]
conds <- c(rep("NS", 7), rep("S", 7))
x <- aldex.clr(selex, conds, mc.samples = 2, denom = "all", verbose = FALSE)
conditions <- numConditions(x)
Want to suggest features or report bugs for rdrr.io? Use the GitHub issue tracker.
Questions? Problems? Suggestions? Tweet to @rdrrHQian@mutexlabs.com.
All documentation is copyright its authors; we didn't write any of that.