Files in BioMM

BioMM: Biological-informed Multi-stage Machine learning framework for phenotype prediction using omics data

README.md

NAMESPACE

DESCRIPTION

build/vignette.rds

R/dataProcess.R R/exploreStat.R R/resultReport.R R/BioMM.R vignettes/BioMMtutorial.Rmd man/reconByUnsupervised.Rd man/baseRandForest.Rd man/omics2pathlist.Rd man/baseSVM.Rd man/plotVarExplained.Rd man/plotRankedFeature.Rd man/predByBS.Rd man/getDataByFilter.Rd man/cirPlot4pathway.Rd man/BioMMstage2pred.Rd man/predByFS.Rd man/reconBySupervised.Rd man/baseGLMnet.Rd man/predByCV.Rd man/baseModel.Rd man/classifiACC.Rd man/getMetrics.Rd man/BioMM.Rd tests/runTest.R

inst/NEWS

inst/doc/BioMMtutorial.R

inst/doc/BioMMtutorial.html

inst/doc/BioMMtutorial.Rmd

inst/extdata/keggDB.rds

inst/extdata/expData.rds

inst/extdata/keggID2name202008.rds

inst/extdata/methylData.rds

inst/extdata/cpgAnno.rds

inst/extdata/goDB.rds

inst/scripts/data4demo.R inst/unitTests/test_BaseModels.R inst/unitTests/test_inputFiles.R

BioMM documentation built on Nov. 8, 2020, 11:04 p.m.