expr0: Yellow Fever gene expression data from GEO study GSE13485

In CEMiTool: Co-expression Modules identification Tool

Description

Modified data from a yellow fever vaccination study by Querec et al, 2009. In order to reduce package size, only the 4000 genes with the highest variance were selected for this dataset.

Usage

data(expr0)

Format

An object of class data.frame

Source

GEO

References

Querec TD, Akondy RS, Lee EK, Cao W et al. Systems biology approach predicts immunogenicity of the yellow fever vaccine in humans. Nat Immunol 2009 Jan;10(1):116-25. PMID: 19029902 PubMed

Examples

data(expr0)
# Run CEMiTool analysis
## Not run: cemitool(expr0)

Example output

Warning message:
replacing previous import ‘ggplot2::annotate’ by ‘ggpmisc::annotate’ when loading ‘CEMiTool’ 

CEMiTool documentation built on March 13, 2021, 2 a.m.