generate_report: CEMiTool report

In CEMiTool: Co-expression Modules identification Tool

Description

Creates report for CEMiTool results

Usage

generate_report(cem, ...)

## S4 method for signature 'CEMiTool'
generate_report(
  cem,
  max_rows_ora = 50,
  title = "Report",
  directory = "./Reports/Report",
  force = FALSE,
  ...
)

Arguments

cem	Object of class CEMiTool.
...	parameters to rmarkdown::render
max_rows_ora	maximum number of rows in Over Representation Analysis table results
title	Character string with the title of the report.
directory	Directory name for results.
force	If the directory exists, execution will not stop.

Value

An HTML file with an interactive report of CEMiTool analyses.

Examples

## Not run:   
# Get example CEMiTool object
data(cem)
generate_report(cem, output_format=c("pdf_document", "html_document"))

## End(Not run)

CEMiTool documentation built on March 13, 2021, 2 a.m.