API for CancerMutationAnalysis
Cancer mutation analysis

Global functions
BackRatesBreast Man page
BackRatesColon Man page
BackRatesGBM Man page
BackRatesMB Man page
BackRatesPancreas Man page
EntrezID2Name Man page
GeneAlterBreast Man page
GeneAlterColon Man page
GeneAlterGBM Man page
GeneAlterMB Man page
GeneAlterPancreas Man page
GeneCovBreast Man page
GeneCovColon Man page
GeneCovGBM Man page
GeneCovMB Man page
GeneCovPancreas Man page
GeneID2Name11 Man page
GeneSampBreast Man page
GeneSampColon Man page
GeneSampGBM Man page
GeneSampMB Man page
GeneSampPancreas Man page
SetMethodsSims-class Man page
SetMethodsSims-method Man page
add.zeroes.cma.data Source code
cma.fdr Man page Source code
cma.scores Man page Source code
cma.set.sim Man page Source code
cma.set.stat Man page Source code
cma.simulator Source code
combine.sims Man page Source code
ebfdr Source code
extract.sims.method Man page Source code
get.EventsBySampleBySet.from.EventsBySample Source code
get.cdf.het.berns Source code
get.p.vals.from.q.probs Source code
get.p.vals.from.q.probs.het Source code
get.p.vals.one.set Source code
get.stand.ts Source code
make.cov.obj Source code
make.mut.obj Source code
make.singled.out.samp.mut Source code
p2q Source code
pass.null.het.p.values Source code
pass.null.p.values Source code
perm.null.het.p.values Source code
perm.null.p.values Source code
poisbin Source code
runGSEA Source code
shorten.gene.names Source code
show,SetMethodsSims-method Man page
sim.data Source code
sourceDir Source code
CancerMutationAnalysis documentation built on Nov. 17, 2017, 9:33 a.m.