GeneSampMB: Data from the Parsons et al. 2011 study: Number of samples...
In CancerMutationAnalysis: Cancer mutation analysis
Description
Usage
Format
References
See Also
Description
Number of samples analyzed for each gene and
screen type from the
Parsons et al. 2011 medulloblastoma (MB) study.
Usage
1
data(ParsonsMB11)
Format
The number of samples in the MB study from Parsons et al.,
broken down by
gene and screen (Discovery and Prevalence).
The object is a data frame, with the variables:
Gene, Screen, and NrSamp (number of samples).
The two possible values for Screen are Disc ("Discovery")
and Prev ("Prevalence").
References
Parsons DW, Li M, Zhang X, Jones S, Leary RJ, Lin J, Boca SM, Carter
H, Samayoa J, Bettegowda C, et al.
The genetic landscape of the childhood cancer medulloblastoma.
Science. DOI: 10.1126/science.1198056
Parmigiani G, Lin J, Boca S, Sjoeblom T, Kinzler KW,
Velculescu VE, Vogelstein B. Statistical methods for the analysis of
cancer genome sequencing data.
http://www.bepress.com/jhubiostat/paper126/
See Also
cma.scores, cma.fdr,
cma.set.stat, cma.set.sim,
SimMethodsSims-class,
GeneAlterMB,
GeneCovMB
CancerMutationAnalysis documentation built on Nov. 8, 2020, 6:47 p.m.
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Description Usage Format References See Also
Description
Number of samples analyzed for each gene and screen type from the Parsons et al. 2011 medulloblastoma (MB) study.
Usage
1 | data(ParsonsMB11)
|
Format
The number of samples in the MB study from Parsons et al., broken down by gene and screen (Discovery and Prevalence). The object is a data frame, with the variables: Gene, Screen, and NrSamp (number of samples). The two possible values for Screen are Disc ("Discovery") and Prev ("Prevalence").
References
Parsons DW, Li M, Zhang X, Jones S, Leary RJ, Lin J, Boca SM, Carter H, Samayoa J, Bettegowda C, et al. The genetic landscape of the childhood cancer medulloblastoma. Science. DOI: 10.1126/science.1198056
Parmigiani G, Lin J, Boca S, Sjoeblom T, Kinzler KW, Velculescu VE, Vogelstein B. Statistical methods for the analysis of cancer genome sequencing data. http://www.bepress.com/jhubiostat/paper126/
See Also
cma.scores, cma.fdr,
cma.set.stat, cma.set.sim,
SimMethodsSims-class,
GeneAlterMB,
GeneCovMB
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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