peakHeatmap: peakHeatmap

Description Usage Arguments Value Author(s)

View source: R/plotTagMatrix.R

Description

plot the heatmap of peaks align to flank sequences of TSS

Usage

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peakHeatmap(peak, weightCol = NULL, TxDb = NULL, upstream = 1000,
  downstream = 1000, xlab = "", ylab = "", title = NULL, color = NULL,
  verbose = TRUE)

Arguments

peak

peak file or GRanges object

weightCol

column name of weight

TxDb

TxDb object

upstream

upstream position

downstream

downstream position

xlab

xlab

ylab

ylab

title

title

color

color

verbose

print message or not

Value

figure

Author(s)

G Yu


ChIPseeker documentation built on May 2, 2018, 2:36 a.m.