plotAvgProf: plotAvgProf
In ChIPseeker: ChIPseeker for ChIP peak Annotation, Comparison, and Visualization
Description
Usage
Arguments
Value
Author(s)
View source: R/plotTagMatrix.R
Description
plot the profile of peaks
Usage
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plotAvgProf(
tagMatrix,
xlim,
xlab = "Genomic Region (5'->3')",
ylab = "Peak Count Frequency",
conf,
facet = "none",
free_y = TRUE,
...
)
Arguments
tagMatrix
tagMatrix or a list of tagMatrix
xlim
xlim
xlab
x label
ylab
y label
conf
confidence interval
facet
one of 'none', 'row' and 'column'
free_y
if TRUE, y will be scaled by AvgProf
...
additional parameter
Value
ggplot object
Author(s)
G Yu; Y Yan
ChIPseeker documentation built on March 6, 2021, 2 a.m.
R Package Documentation
Browse R Packages
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Author(s)
View source: R/plotTagMatrix.R
Description
plot the profile of peaks
Usage
1 2 3 4 5 6 7 8 9 10 | plotAvgProf(
tagMatrix,
xlim,
xlab = "Genomic Region (5'->3')",
ylab = "Peak Count Frequency",
conf,
facet = "none",
free_y = TRUE,
...
)
|
Arguments
tagMatrix |
tagMatrix or a list of tagMatrix |
xlim |
xlim |
xlab |
x label |
ylab |
y label |
conf |
confidence interval |
facet |
one of 'none', 'row' and 'column' |
free_y |
if TRUE, y will be scaled by AvgProf |
... |
additional parameter |
Value
ggplot object
Author(s)
G Yu; Y Yan
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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