Description Usage Arguments Value Author(s)
View source: R/getGenomicAnnotation.R
get Genomic Annotation of peaks
1 2 3 4 5 6 7 8 9 | getGenomicAnnotation(
peaks,
distance,
tssRegion = c(-3000, 3000),
TxDb,
level,
genomicAnnotationPriority,
sameStrand = FALSE
)
|
peaks |
peaks in GRanges object |
distance |
distance of peak to TSS |
tssRegion |
tssRegion, default is -3kb to +3kb |
TxDb |
TxDb object |
level |
one of gene or transcript |
genomicAnnotationPriority |
genomic Annotation Priority |
sameStrand |
whether annotate gene in same strand |
character vector
G Yu
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