seq2gene: seq2gene

Description Usage Arguments Value Author(s)

View source: R/seq2gene.R

Description

annotate genomic regions to genes in many-to-many mapping

Usage

1
seq2gene(seq, tssRegion, flankDistance, TxDb, sameStrand = FALSE)

Arguments

seq

genomic regions in GRanges object

tssRegion

TSS region

flankDistance

flanking search radius

TxDb

TranscriptDb object

sameStrand

logical whether find nearest/overlap gene in the same strand

Value

gene vector

Author(s)

Guangchuang Yu


ChIPseeker documentation built on Nov. 1, 2018, 2:04 a.m.