mvHisto_HC: Histogram of missing values

In DAPAR: Tools for the Differential Analysis of Proteins Abundance with R

Description

This method plots a histogram of missing values. Same as the function mvHisto but uses the package highcharter

Usage

mvHisto_HC(
  qData,
  samplesData,
  conds,
  indLegend = "auto",
  showValues = FALSE,
  base_palette = NULL
)

Arguments

qData	A dataframe that contains quantitative data.
samplesData	A dataframe where lines correspond to samples and columns to the meta-data for those samples.
conds	A vector of the conditions (one condition per sample).
indLegend	The indices of the column name's in pData() tab
showValues	A logical that indicates wether numeric values should be drawn above the bars.
base_palette	xxx

Value

A histogram

Author(s)

Florence Combes, Samuel Wieczorek

Examples

utils::data(Exp1_R25_pept, package='DAPARdata')
qData <- Biobase::exprs(Exp1_R25_pept)
samplesData <- Biobase::pData(Exp1_R25_pept)
conds <- Biobase::pData(Exp1_R25_pept)[,"Condition"]
mvHisto_HC(qData, samplesData, conds, indLegend="auto", showValues=TRUE)

DAPAR documentation built on April 11, 2021, 6 p.m.