API for GeneSelector
Stability and Aggregation of ranked gene lists

Global functions
AdjustPvalues Man page Source code
AggregateMC Man page
AggregateMC,RepeatedRanking-method Man page
AggregateMC-methods Man page
AggregatePenalty Man page
AggregatePenalty,RepeatedRanking-method Man page
AggregatePenalty-methods Man page
AggregateSVD Man page
AggregateSVD,RepeatedRanking-method Man page
AggregateSVD-methods Man page
AggregateSimple Man page
AggregateSimple,RepeatedRanking-method Man page
AggregateSimple-methods Man page
AggregatedRanking Man page
AggregatedRanking-class Man page
BootMatrix Man page
BootMatrix-class Man page
FoldMatrix Man page
FoldMatrix-class Man page
FoldMatrix-method Man page
GeneRanking Man page
GeneRanking-class Man page
GeneSelector Man page
GeneSelector,list-method Man page
GeneSelector-methods Man page
GeneSelector-package Man page
GeneSelectorOutput Man page
GeneSelectorOutput-class Man page
GenerateBootMatrix Man page
GenerateBootMatrix,ExpressionSet,character-method Man page
GenerateBootMatrix,missing,factor-method Man page
GenerateBootMatrix,missing,numeric-method Man page
GenerateBootMatrix-methods Man page
GenerateFoldMatrix Man page
GenerateFoldMatrix,ExpressionSet,character-method Man page
GenerateFoldMatrix,missing,factor-method Man page
GenerateFoldMatrix,missing,numeric-method Man page
GenerateFoldMatrix-methods Man page
GetStabilityDistance Man page
GetStabilityDistance,RepeatedRanking-method Man page
GetStabilityDistance-methods Man page
GetStabilityOverlap Man page
GetStabilityOverlap,RepeatedRanking-method Man page
GetStabilityOverlap-methods Man page
GetStabilityUnion Man page
GetStabilityUnion,RepeatedRanking-method Man page
GetStabilityUnion-methods Man page
HeatmapRankings Man page
HeatmapRankings,RepeatedRanking-method Man page
HeatmapRankings-methods Man page
MergeMethods Man page
MergeMethods,list-method Man page
MergeMethods-methods Man page
MergeRankings Man page
MergeRankings,RepeatedRanking,RepeatedRanking-method Man page
MergeRankings-methods Man page
RankingBaldiLong Man page
RankingBaldiLong,ExpressionSet,character-method Man page
RankingBaldiLong,matrix,factor-method Man page
RankingBaldiLong,matrix,numeric-method Man page
RankingBaldiLong-methods Man page
RankingEbam Man page
RankingEbam,ExpressionSet,character-method Man page
RankingEbam,matrix,factor-method Man page
RankingEbam,matrix,numeric-method Man page
RankingEbam-methods Man page
RankingFC Man page
RankingFC,ExpressionSet,character-method Man page
RankingFC,matrix,factor-method Man page
RankingFC,matrix,numeric-method Man page
RankingFC-methods Man page
RankingFoxDimmic Man page
RankingFoxDimmic,ExpressionSet,character-method Man page
RankingFoxDimmic,matrix,factor-method Man page
RankingFoxDimmic,matrix,numeric-method Man page
RankingFoxDimmic-methods Man page
RankingLimma Man page
RankingLimma,ExpressionSet,character-method Man page
RankingLimma,matrix,factor-method Man page
RankingLimma,matrix,numeric-method Man page
RankingLimma-methods Man page
RankingPermutation Man page
RankingPermutation,ExpressionSet,character-method Man page
RankingPermutation,matrix,factor-method Man page
RankingPermutation,matrix,numeric-method Man page
RankingPermutation-methods Man page
RankingSam Man page
RankingSam,ExpressionSet,character-method Man page
RankingSam,matrix,factor-method Man page
RankingSam,matrix,numeric-method Man page
RankingSam-methods Man page
RankingShrinkageT Man page
RankingShrinkageT,ExpressionSet,character-method Man page
RankingShrinkageT,matrix,factor-method Man page
RankingShrinkageT,matrix,numeric-method Man page
RankingShrinkageT-methods Man page
RankingSoftthresholdT Man page
RankingSoftthresholdT,ExpressionSet,character-method Man page
RankingSoftthresholdT,matrix,factor-method Man page
RankingSoftthresholdT,matrix,numeric-method Man page
RankingSoftthresholdT-methods Man page
RankingTstat Man page
RankingTstat,ExpressionSet,character-method Man page
RankingTstat,matrix,factor-method Man page
RankingTstat,matrix,numeric-method Man page
RankingTstat-methods Man page
RankingWelchT Man page
RankingWelchT,ExpressionSet,character-method Man page
RankingWelchT,matrix,factor-method Man page
RankingWelchT,matrix,numeric-method Man page
RankingWelchT-methods Man page
RankingWilcEbam Man page
RankingWilcEbam,ExpressionSet,character-method Man page
RankingWilcEbam,matrix,factor-method Man page
RankingWilcEbam,matrix,numeric-method Man page
RankingWilcEbam-methods Man page
RankingWilcoxon Man page
RankingWilcoxon,ExpressionSet,character-method Man page
RankingWilcoxon,matrix,factor-method Man page
RankingWilcoxon,matrix,numeric-method Man page
RankingWilcoxon-methods Man page
RepeatRanking Man page
RepeatRanking,GeneRanking,BootMatrix,missing,missing,missing-met Man page
RepeatRanking,GeneRanking,FoldMatrix,ANY,missing,missing-method Man page
RepeatRanking,GeneRanking,missing,missing,ANY,ANY-method Man page
RepeatRanking-methods Man page
RepeatedRanking Man page
RepeatedRanking-class Man page
SelectedGenes Man page
SelectedGenes,GeneSelectorOutput-method Man page
SelectedGenes-methods Man page
StabilityDistance Man page
StabilityDistance-class Man page
StabilityOverlap Man page
StabilityOverlap-class Man page
StabilityUnion Man page
StabilityUnion-class Man page
combn Man page Source code
dispersion Man page
dispersion,RepeatedRanking-method Man page
getLambda Man page Source code
overlap Man page Source code
plot,AggregatedRanking,missing-method Man page
plot,GeneSelectorOutput,missing-method Man page
plot,RepeatedRanking Man page
plot,RepeatedRanking,missing-method Man page
plot,StabilityOverlap,missing-method Man page
plot,StabilityUnion,missing-method Man page
samplingcontrol Man page Source code
show,AggregatedRanking-method Man page
show,BootMatrix-method Man page
show,FoldMatrix-method Man page
show,GeneRanking-method Man page
show,GeneSelectorOutput-method Man page
show,RepeatedRanking-method Man page
show,StabilityDistance-method Man page
show,StabilityOverlap-method Man page
show,StabilityUnion-method Man page
summary,BootMatrix-method Man page Man page
summary,FoldMatrix-method Man page
summary,GeneRanking Man page
summary,GeneRanking-method Man page
summary,StabilityDistance-method Man page
summary,StabilityOverlap-method Man page
toplist Man page
toplist,AggregatedRanking-method Man page
toplist,GeneRanking-method Man page
toplist,GeneSelectorOutput-method Man page
toplist,RepeatedRanking-method Man page
toplist-methods Man page
toydata Man page
unioncount Man page Source code
GeneSelector documentation built on May 31, 2017, 11:32 a.m.