go_2_html: Information on a GeneOntology identifier

In GeneTonic: Enjoy Analyzing And Integrating The Results From Differential Expression Analysis And Functional Enrichment Analysis

Description

Assembles information, in HTML format, regarding a Gene Ontology identifier

Usage

go_2_html(go_id, res_enrich = NULL)

Arguments

go_id	Character, specifying the GeneOntology identifier for which to retrieve information
res_enrich	A data.frame object, storing the result of the functional enrichment analysis. If not provided, the experiment-related information is not shown, and only some generic info on the identifier is displayed. See more in the main function, GeneTonic(), to check the formatting requirements (a minimal set of columns should be present).

Details

Also creates a link to the AmiGO database

Value

HTML content related to a GeneOntology identifier, to be displayed in web applications (or inserted in Rmd documents)

Examples

go_2_html("GO:0002250")
go_2_html("GO:0043368")

GeneTonic documentation built on Nov. 8, 2020, 5:27 p.m.