hmec.IS: Hi-C data from HMEC cell line - chromosome 22 at 500kb...
In HiCcompare: HiCcompare: Joint normalization and comparative analysis of multiple Hi-C datasets
Description
Usage
Format
Value
Source
Description
An InteractionSet object 2490 interactions and 1 metadata column
containing the Interaction Frequencies
Usage
1
Format
An InteractionSet with 2490 rows and 1 metadata column:
- IF
The Interaction Frequency - number of read counts found
for the interaction between region1 and region2
Value
A matrix
Source
Data from the Aiden Lab. See their website at
http://www.aidenlab.org/
Or the the GEO link to download the data
https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE63525
HiCcompare documentation built on Nov. 8, 2020, 8:26 p.m.
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Description Usage Format Value Source
Description
An InteractionSet object 2490 interactions and 1 metadata column containing the Interaction Frequencies
Usage
1 |
Format
An InteractionSet with 2490 rows and 1 metadata column:
- IF
The Interaction Frequency - number of read counts found for the interaction between region1 and region2
Value
A matrix
Source
Data from the Aiden Lab. See their website at http://www.aidenlab.org/ Or the the GEO link to download the data https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE63525
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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