remove_centromere: Function to remove centromere columns and rows from a full...
In HiCcompare: HiCcompare: Joint normalization and comparative analysis of multiple Hi-C datasets
Description
Usage
Arguments
Value
Examples
View source: R/remove_centromere.R
Description
Function to remove centromere columns and rows from a full Hi-C
contact matrix
Usage
1
remove_centromere(mat)
Arguments
mat
A full Hi-C matrix
Value
A list of (1) the column/row numbers of the centromere and
(2) the Hi-c matrix with the centromere removed
Examples
1
2
3
4
m <- matrix(rpois(100, 5), 10, 10)
m[5,] <- 0
m[,5] <- 0
remove_centromere(m)
HiCcompare documentation built on Nov. 8, 2020, 8:26 p.m.
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Description Usage Arguments Value Examples
View source: R/remove_centromere.R
Description
Function to remove centromere columns and rows from a full Hi-C contact matrix
Usage
1 | remove_centromere(mat)
|
Arguments
mat |
A full Hi-C matrix |
Value
A list of (1) the column/row numbers of the centromere and (2) the Hi-c matrix with the centromere removed
Examples
1 2 3 4 | m <- matrix(rpois(100, 5), 10, 10)
m[5,] <- 0
m[,5] <- 0
remove_centromere(m)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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