summary.thresholdSCRNACountMatrix: Summarize the effect of thresholding

Description Usage Arguments Value Methods (by generic)

View source: R/thresholdSCRNA.R

Description

Returns the proportion of (putative) expression, the variance of expressed cells, and -log10 shapiro-wilk tests for normality on the expressed cells

Usage

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## S3 method for class 'thresholdSCRNACountMatrix'
summary(object, ...)

## S3 method for class 'summaryThresholdSCRNA'
print(x, ...)

Arguments

object

a thresholdSCRNACountMatrix

...

currently ignored

x

a summaryThresholdSCRNA object, ie output from summary.thresholdSCRNACountMatrix

Value

a list of statistics on the original data, and thresholded data

Methods (by generic)


MAST documentation built on Nov. 8, 2020, 8:19 p.m.