MCRestimate: Misclassification error estimation with cross-validation

This package includes a function for combining preprocessing and classification methods to calculate misclassification errors

AuthorMarc Johannes, Markus Ruschhaupt, Holger Froehlich, Ulrich Mansmann, Andreas Buness, Patrick Warnat, Wolfgang Huber, Axel Benner, Tim Beissbarth
Date of publicationNone
MaintainerMarc Johannes <m.johannes@dkfz.de>
LicenseGPL (>= 2)
Version2.30.0

View on Bioconductor

Functions

class.factor.format Man page
ClassifierBuild Man page
ClassifierBuild.default Man page
cluster.kmeans.mean Man page
GPLS.wrap Man page
identity Man page
important.variable.names Man page
intersectList Man page
MCRconfusion Man page
MCRestimate Man page
MCRestimate.default Man page
MCRestimateMerge Man page
MCRindError Man page
MCRwrongsamples Man page
PAM.wrap Man page
plotIndGroupVotes Man page
plot.MCRestimate Man page
PLR Man page
PLR.wrap Man page
predict.PLR Man page
print.MCRestimate Man page
replace.NA Man page
RF.wrap Man page
select.NA.elements Man page
SVM.OVA.wrap Man page
SVM.wrap Man page
varSel.AUC Man page
varSel.highest.t.stat Man page
varSel.highest.var Man page
varSel.impute.NA Man page
varSel.removeManyNA Man page

Files

MCRestimate/DESCRIPTION
MCRestimate/NAMESPACE
MCRestimate/R
MCRestimate/R/ClassifierBuild.R MCRestimate/R/MCRconfusion.R MCRestimate/R/MCRestimate.R MCRestimate/R/MCRestimateMerge.R MCRestimate/R/MCRwrongsamples.R MCRestimate/R/SVM_OVA.R MCRestimate/R/class.factor.format.R MCRestimate/R/important.variable.names.R MCRestimate/R/indVoteFunction.R MCRestimate/R/intersectList.R MCRestimate/R/logReg.R MCRestimate/R/plot.MCRestimate.R MCRestimate/R/print.MCRestimate.R MCRestimate/R/selectionFunctions.R
MCRestimate/R/selectionFunctions3.R
MCRestimate/R/whatiscorrect.R MCRestimate/R/wrapper.functions.R
MCRestimate/build
MCRestimate/build/vignette.rds
MCRestimate/inst
MCRestimate/inst/doc
MCRestimate/inst/doc/UsingMCRestimate.R
MCRestimate/inst/doc/UsingMCRestimate.Rnw
MCRestimate/inst/doc/UsingMCRestimate.pdf
MCRestimate/inst/scripts
MCRestimate/inst/scripts/MCRestimateBlueprint.Rnw
MCRestimate/inst/scripts/Template.R
MCRestimate/man
MCRestimate/man/ClassifierBuild.Rd MCRestimate/man/MCRconfusion.Rd MCRestimate/man/MCRestimate.Rd MCRestimate/man/MCRestimateMerge.Rd MCRestimate/man/PLR.Rd MCRestimate/man/SVM.OVA.wrap.Rd MCRestimate/man/class.factor.format.Rd MCRestimate/man/geneReduction.Rd MCRestimate/man/important.variable.names.Rd MCRestimate/man/indVotes.Rd MCRestimate/man/intersectList.Rd MCRestimate/man/plot.MCRestimate.Rd MCRestimate/man/replace.NA.Rd MCRestimate/man/select.NA.elements.Rd MCRestimate/man/wrapper.fkt.Rd
MCRestimate/vignettes
MCRestimate/vignettes/UsingMCRestimate.Rnw

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

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