Individual Error of the outer cross-validations

Description

MCRindError returns a vector with the individual number of incorrect classified samples for each cross-validation plotIndGroupVotes plots the individual group votes

Usage

 1
 2
 3
 4
 5
 6
 7
 8
 9
10
MCRindError(MCRe,
						perGroup=FALSE)
						
plotIndGroupVotes(MCRest,
									PvD= 0.5,
									dotCol="red",
									errCol="black",
									xlab="",
									ylab="# misclassified samples (mean + SD)",
									...)						

Arguments

MCRe

Object of S3 class MCRestimate

perGroup

returns a vector with the individual number of incorrect classified samples for each group

MCRest

Object of S3 class MCRestimate

PvD

Offset of the text that belongs to a specific point in the plot

dotCol

Color of the dots

errCol

Line color between points

xlab

Label of X-Axis

ylab

Label of Y-Axis

...

Advanced options to the plot command

Value

MCRindError returns a vector of individual errors.

Author(s)

Markus Ruschhaupt mailto:m.ruschhaupt@dkfz.de

See Also

MCRestimate

Examples

1
2
3
4
5
library(golubEsets)
data(Golub_Train)
exSet <- Golub_Train[1:500,]
result1 <-MCRestimate(exSet,"ALL.AML",classification.fun="RF.wrap",cross.outer=3,cross.repeat=3)
MCRindError(result1)