MODA can be used to estimate and construct condition-specific gene co-expression networks, and identify differentially expressed subnetworks as conserved or condition specific modules which are potentially associated with relevant biological processes.
|Author||Dong Li, James B. Brown, Luisa Orsini, Zhisong Pan, Guyu Hu and Shan He|
|Bioconductor views||DifferentialExpression GeneExpression Microarray Network|
|Date of publication||None|
|Maintainer||Dong Li <firstname.lastname@example.org>|
|License||GPL (>= 2)|
CompareAllNets: Illustration of network comparison
comparemodulestwonets: Illustration of two networks comparison
PartitionDensity: Illustration of partition density
PartitionModularity: Illustration of modularity density
WeightedModulePartitionDensity: Illustration of Modules detection
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