Description Usage Arguments Value Author(s) References Examples
Calculate the average modularity of a partition. The modularity of each module is defined from a natural generalization of unweighted case.
gene similarity matrix
vector indicates the partition label for genes
partition modularity, defined as average modularity of all modules
Dong Li, email@example.com
Newman, Mark EJ. "Analysis of weighted networks." Physical review E 70.5 (2004): 056131.
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