R/TMT6.R

In MSnbase: Base Functions and Classes for Mass Spectrometry and Proteomics

TMT6 <- new("ReporterIons",
            description = "6-plex TMT tags",
            name = "TMT6",
            reporterNames = c("TMT6.126", "TMT6.127", "TMT6.128",
                              "TMT6.129", "TMT6.130", "TMT6.131"),
            mz = c(126.127725, 127.131079, 128.134433, 129.137787,
                   130.141141, 131.138176),
            col = c("red", "purple", "blue", "steelblue", "green",
                    "yellow"),
            width = 0.05)


TMT6b <- new("ReporterIons",
             description = "6-plex TMT tags",
             name = "TMT6",
             reporterNames = c("TMT6.126", "TMT6.127", "TMT6.128",
                               "TMT6.129", "TMT6.130", "TMT6.131"),
             mz = c(126.127725, 127.124760, 128.134433, 129.131468,
                    130.141141, 131.138176),
             col = c("red", "purple", "blue", "steelblue", "green",
                     "yellow"),
             width = 0.05)